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Category Archives: Bioinformatics
Two upcoming workshops on bioinformatics and machine learning / pattern mining
I am glad to announce that I am co-organizing two workshop related to machine learning and pattern mining with bioinformatics at the upcoming IEEE BIBM 2026 and IEEE ICDM 2026 conferences. The details are below: HP4Moda 2026 (2nd Workshop on Heuristic … Continue reading
Posted in Bioinformatics, cfp, Conference
Tagged ieee bibm, ieee icdm, machine learning, multi-omics, pattern mining, workshop bioinformatics
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The 1st HP4MoDa workshop was held at BIBM 2025
Today, the first workshop 1st Workshop on Heuristic and Pattern Mining for Multi-Omics Data Analytics was held at IEEE BIBM 2025, online. I co-organize this workshop with M. Saqib Nawaz and other collaborators. The workshop focus on various machine learning … Continue reading
Posted in Bioinformatics, Conference
Tagged bibm, bioinformatics, hp4moda, ieee bibm, machine learning, pattern, pattern mining, workshop
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CFP: HP4MoDa 2025 @ IEEE BIBM 2025
Today, I would like to announce a new workshop that will be held at the IEEE BIBM 2025 conference, called 1st Workshop on Heuristic and Pattern Mining for Multi-Omics Data Analytics. This workshop is suitable for pattern mining papers and … Continue reading
Posted in Bioinformatics, cfp, Conference, Data Mining, Machine Learning
Tagged bibm, bioinformatics, cfp, data mining, hp4moda, machine learning, pattern mining
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Fast and Effective Genome Sequence Compression, with a multi-purpose method called HMG (2025)
Genomic data is growing at an unprecedented rate, but storing and transmitting it efficiently remains a challenge. Several solutions have been proposed in the literature for compressing genome sequences in recent years such as JARVIS3, GeCo3, and NUHT. However, several … Continue reading
CFP: PM4B 2005: A new workshop on pattern mining and machine learning in bioinformatics @ PAKDD 2025
Today, I would like to announce that we are creating a new workshop for PAKDD 2025 called the 1st Workshop on Pattern mining and Machine learning for Bioinformatics (PM4B 2025). The goal of the workshop is to establish a collaborative platform … Continue reading
Posted in artificial intelligence, Big data, Bioinformatics, Conference, Data Mining, Data science
Tagged big data, bioinformatics, cfp, machine learning, pakdd, pattern mining, pm4b, workshop
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Introducing PSAC-PDB: A Novel Approach to Protein Structure Analysis and Classification
In this blog post, I will give a short overview of our recent research paper about protein structure analysis and classification by my team (M. S. Nawaz, P. Fournier-Viger, Y. He and Q. Zhang). Proteins are essential molecules for life, … Continue reading
Posted in Bioinformatics
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Brief report about the BIBM 2022 conference
This week, I have attended the BIBM 2022 (IEEE International Conference on Bioinformatics and Biomedicine) conference online. I will give a brief report about this conference, although I did not have time to attend many sessions. BIBM 2022 was held … Continue reading
Posted in Bioinformatics, Conference
Tagged bibm, bibm2022, bioinformatics, biomedicine, conference, ieee
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Analyzing the COVID-19 genome with AI and data mining techniques (paper + data + code)
Recently, my team has been working on analyzing COVID-19 genome sequences using pattern mining and other data mining and AI techniques. We have recently published a paper in the Applied Intelligence journal about this. In this blog post, I will … Continue reading