Category Archives: Bioinformatics

CFP: HP4MoDa 2025 @ IEEE BIBM 2025

Posted on 2025-05-30 by Philippe Fournier-Viger

Today, I would like to announce a new workshop that will be held at the IEEE BIBM 2025 conference, called 1st Workshop on Heuristic and Pattern Mining for Multi-Omics Data Analytics. This workshop is suitable for pattern mining papers and … Continue reading →

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Fast and Effective Genome Sequence Compression, with a multi-purpose method called HMG (2025)

Posted on 2025-03-26 by Philippe Fournier-Viger

Genomic data is growing at an unprecedented rate, but storing and transmitting it efficiently remains a challenge. Several solutions have been proposed in the literature for compressing genome sequences in recent years such as JARVIS3, GeCo3, and NUHT. However, several … Continue reading →

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CFP: PM4B 2005: A new workshop on pattern mining and machine learning in bioinformatics @ PAKDD 2025

Posted on 2024-12-31 by Philippe Fournier-Viger

Today, I would like to announce that we are creating a new workshop for PAKDD 2025 called the 1st Workshop on Pattern mining and Machine learning for Bioinformatics (PM4B 2025). The goal of the workshop is to establish a collaborative platform … Continue reading →

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Introducing PSAC-PDB: A Novel Approach to Protein Structure Analysis and Classification

Posted on 2023-03-30 by Philippe Fournier-Viger

In this blog post, I will give a short overview of our recent research paper about protein structure analysis and classification by my team (M. S. Nawaz, P. Fournier-Viger, Y. He and Q. Zhang). Proteins are essential molecules for life, … Continue reading →

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Brief report about the BIBM 2022 conference

Posted on 2022-12-06 by Philippe Fournier-Viger

This week, I have attended the BIBM 2022 (IEEE International Conference on Bioinformatics and Biomedicine) conference online. I will give a brief report about this conference, although I did not have time to attend many sessions. BIBM 2022 was held … Continue reading →

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Analyzing the COVID-19 genome with AI and data mining techniques (paper + data + code)

Posted on 2021-02-18 by Philippe Fournier-Viger

Recently, my team has been working on analyzing COVID-19 genome sequences using pattern mining and other data mining and AI techniques. We have recently published a paper in the Applied Intelligence journal about this. In this blog post, I will … Continue reading →

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